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23 Open 18 Closed
23 Open 18 Closed
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Issues list

Pizzly with single-end data
#46 opened Jan 18, 2024 by andreyurch
Segmentation Fault
#44 opened Jan 25, 2023 by jollymrt
1
fusion locations
#42 opened Feb 11, 2022 by jlgabre
Because of dependence on Kallisto, is it necessary to trim?
#41 opened May 7, 2021 by ahdee
Bad Alloc error and no .hd5 file being generated
#40 opened Oct 9, 2020 by rahul-yadav-supra
Working version of pizzly available?
#39 opened May 1, 2020 by mapostolides
2
handling duplicated sequences in output.fusions.fasta
#38 opened Apr 8, 2020 by racng
scripts/flatten_json.py - too unspecific to have in /usr/bin
#37 opened Feb 20, 2020 by smoe
license of data files shipping in "test" folder?
#36 opened Feb 20, 2020 by smoe
"seqan::ParseError" debugging
#35 opened Jan 11, 2020 by amwa
"pizzly: Not enough arguments were provided"
#34 opened Nov 22, 2019 by AmrR101
1
pizzly splitcount 0
#33 opened Sep 16, 2019 by igordot
1
question on the confidence of the fusion gene transcripts
#32 opened Mar 12, 2019 by maximillo
Unknown error when attempting to run pizzly
#30 opened Oct 11, 2018 by MichaelPisano
1
using pizzly on Augustus predictions
#29 opened Jul 17, 2018 by evolgenomology
splitcount = 0
#28 opened Jun 11, 2018 by mathieu-massaviol
Segmentation fault: 11
#26 opened May 9, 2018 by ttamho
1
Extracting reads/read pairs mapping to fusions
#24 opened Jan 11, 2018 by virajbdeshpande
Running with more than one file for left/right reads
#23 opened Sep 13, 2017 by holtgrewe
1
GTF file must be sorted in gene->transcript->exon order
#22 opened Sep 9, 2017 by roryk
pizzly missing a fusion from SRR1659964
#19 opened Aug 22, 2017 by roryk
14
Error, could not find any transcript sequences
#16 opened Aug 14, 2017 by ndaniel
5
Notes and compiled download don't match bug
#13 opened Aug 2, 2017 by lachlansimpson
1
ProTip! Follow long discussions with comments:>50.