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snakemake-dry-run.yaml
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feat: improved TMB for ctdna Snakemake dry run #2017: Pull request #587 synchronize by jonca79
March 13, 2025 08:53 1m 55s tmb_ctdna
tmb_ctdna
March 13, 2025 08:53 1m 55s
feat: improved TMB for ctdna Snakemake dry run #2016: Pull request #587 opened by jonca79
March 13, 2025 08:52 1m 14s tmb_ctdna
tmb_ctdna
March 13, 2025 08:52 1m 14s
feat: a script that calculates ctDNA fraction Snakemake dry run #2015: Pull request #551 synchronize by jonca79
March 13, 2025 08:39 2m 11s ctDNA
ctDNA
March 13, 2025 08:39 2m 11s
fix: msi is calculated without umi Snakemake dry run #2014: Pull request #586 synchronize by jonca79
March 7, 2025 10:24 1m 37s umi_fixes
umi_fixes
March 7, 2025 10:24 1m 37s
fix: msi is calculated without umi Snakemake dry run #2013: Pull request #586 synchronize by jonca79
March 7, 2025 10:22 2m 9s umi_fixes
umi_fixes
March 7, 2025 10:22 2m 9s
fix: msi is calculated without umi Snakemake dry run #2012: Pull request #586 opened by jonca79
March 7, 2025 10:20 2m 39s umi_fixes
umi_fixes
March 7, 2025 10:20 2m 39s
fix: increase wall time for juli Snakemake dry run #2011: Pull request #577 synchronize by jonca79
March 7, 2025 10:06 2m 31s juli_run_time
juli_run_time
March 7, 2025 10:06 2m 31s
feat: a script that calculates ctDNA fraction Snakemake dry run #2010: Pull request #551 synchronize by jonca79
March 7, 2025 09:58 1m 52s ctDNA
ctDNA
March 7, 2025 09:58 1m 52s
Merge pull request #585 from genomic-medicine-sweden/develop Snakemake dry run #2009: Commit b10571b pushed by jonca79
March 7, 2025 08:38 2m 0s master
master
March 7, 2025 08:38 2m 0s
chore: dev to master Snakemake dry run #2008: Pull request #585 opened by jonca79
March 6, 2025 11:02 1m 47s develop
develop
March 6, 2025 11:02 1m 47s
Merge pull request #584 from genomic-medicine-sweden/jonca79-patch-1 Snakemake dry run #2007: Commit 983ed27 pushed by jonca79
March 6, 2025 11:01 2m 25s develop
develop
March 6, 2025 11:01 2m 25s
test: Update config.yaml Snakemake dry run #2006: Pull request #584 opened by jonca79
March 6, 2025 10:55 2m 31s jonca79-patch-1
jonca79-patch-1
March 6, 2025 10:55 2m 31s
Merge pull request #583 from genomic-medicine-sweden/rerun_incomplete Snakemake dry run #2005: Commit b538cb6 pushed by jonca79
March 6, 2025 08:49 1m 41s develop
develop
March 6, 2025 08:49 1m 41s
chore(Jenkinsfile): Run test with rerun-incomplete Snakemake dry run #2004: Pull request #583 opened by monikaBrandt
March 6, 2025 08:46 2m 0s rerun_incomplete
rerun_incomplete
March 6, 2025 08:46 2m 0s
chore: dev to master Snakemake dry run #2003: Commit 00da162 pushed by jonca79
March 4, 2025 13:17 1m 49s master
master
March 4, 2025 13:17 1m 49s
chore: dev to master Snakemake dry run #2002: Pull request #581 opened by monikaBrandt
March 4, 2025 13:13 2m 57s develop
develop
March 4, 2025 13:13 2m 57s
feat: ctdna config Snakemake dry run #2001: Pull request #580 opened by jonca79
March 3, 2025 14:17 2m 39s ctDNA_config
ctDNA_config
March 3, 2025 14:17 2m 39s
fix(test_input_develop.tsv): rm sample mix-up dev Snakemake dry run #2000: Pull request #579 opened by monikaBrandt
March 3, 2025 09:07 2m 0s update_files_integration_testing_develop
update_files_integration_testing_develop
March 3, 2025 09:07 2m 0s
Merge pull request #579 from genomic-medicine-sweden/update_files_int… Snakemake dry run #1999: Commit 57f79c5 pushed by jonca79
March 3, 2025 09:07 2m 13s develop
develop
March 3, 2025 09:07 2m 13s
Merge pull request #578 from genomic-medicine-sweden/update_files_int… Snakemake dry run #1998: Commit e9ade0e pushed by jonca79
March 3, 2025 08:45 1m 58s develop
develop
March 3, 2025 08:45 1m 58s
fix(test_input_develop.tsv): Remove id_snps dev Snakemake dry run #1997: Pull request #578 opened by monikaBrandt
March 3, 2025 07:57 1m 54s update_files_integration_testing_develop
update_files_integration_testing_develop
March 3, 2025 07:57 1m 54s
Merge pull request #573 from genomic-medicine-sweden/update_files_int… Snakemake dry run #1996: Commit f699b38 pushed by jonca79
February 28, 2025 11:06 1m 54s develop
develop
February 28, 2025 11:06 1m 54s
feat(test_input_develop.tsv): Update list of files tested Snakemake dry run #1995: Pull request #573 synchronize by monikaBrandt
February 28, 2025 10:54 2m 1s update_files_integration_testing_develop
update_files_integration_testing_develop
February 28, 2025 10:54 2m 1s
fix: increase wall time for juli Snakemake dry run #1994: Pull request #577 opened by jonca79
February 24, 2025 14:34 2m 37s juli_run_time
juli_run_time
February 24, 2025 14:34 2m 37s
feat: sort cnv tsv report on gene name Snakemake dry run #1993: Pull request #576 opened by jonca79
February 24, 2025 12:54 2m 21s cnv_report_sorted
cnv_report_sorted
February 24, 2025 12:54 2m 21s