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Pull requests: genomic-medicine-sweden/Twist_Solid

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Pull requests list

fix: msi is calculated without umi
#586 opened Mar 7, 2025 by jonca79 Loading…
5 tasks
chore: release 0.19.0 autorelease: pending
#582 opened Mar 4, 2025 by github-actions bot Loading…
feat: ctdna config
#580 opened Mar 3, 2025 by jonca79 Loading…
5 tasks
fix: increase wall time for juli
#577 opened Feb 24, 2025 by jonca79 Loading…
5 tasks
feat: sort cnv tsv report on gene name
#576 opened Feb 24, 2025 by jonca79 Loading…
5 tasks
fix: General report improvements Lotte
#575 opened Feb 24, 2025 by jonca79 Loading…
5 tasks
fix: remove potential duplicate and missed output of 1p19q
#574 opened Feb 24, 2025 by jonca79 Loading…
5 tasks
feat(MultiQC): enable setting contact info using ENV
#569 opened Jan 23, 2025 by jonca79 Loading…
5 tasks
feat: small del and amp now report affected region instead of gene
#562 opened Jan 16, 2025 by jonca79 Loading…
5 tasks
feat: calculate HRD with Jumble
#559 opened Dec 22, 2024 by jonca79 • Draft
5 tasks
feat: a script that calculates ctDNA fraction
#551 opened Dec 17, 2024 by jonca79 Loading…
5 tasks
feat: vep 113 and AlphaMissense
#512 opened Oct 21, 2024 by jonca79 Loading…
fix: update requirement to fix panda dependency bug
#482 opened Jun 19, 2024 by jonca79 Loading…
5 tasks
feat: Cnv baseline shifter
#455 opened Apr 26, 2024 by jonca79 • Draft
5 tasks
feat: Snakemake8
#435 opened Mar 18, 2024 by jonca79 • Draft
feat: working ngp sge profile
#418 opened Feb 29, 2024 by Smeds • Draft
5 tasks
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