Trying to tack down a windows CI error.

whitwham · Feb 26, 2025 · 5af1a80 · 5af1a80
1 parent bb96e23
commit 5af1a80
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/test/test.pl b/test/test.pl
@@ -631,6 +631,10 @@ sub test_faidx
     cmd("$$opts{bin}/samtools faidx $$opts{tmp}/faidx.fa 1 --write-index"); #ignores write-index
     cmd("echo \"1\n2\n3\" > $$opts{tmp}/1.reg"); #create region file
     cmd("$$opts{bin}/samtools faidx $$opts{tmp}/faidx.fa --write-index -r $$opts{tmp}/1.reg -o $$opts{tmp}/1.fa"); #writes and indexes
+
+    system("ls", "-l", "$$opts{tmp}/faidx.fa.fai");
+    system("ls", "-l", "$$opts{tmp}/1.fa.fai");
+
     cmd("$$opts{diff} $$opts{tmp}/faidx.fa.fai $$opts{tmp}/1.fa.fai");
     cmd("$$opts{bin}/samtools faidx $$opts{tmp}/faidx.fa -r $$opts{tmp}/1.reg -o $$opts{tmp}/out.fa.gz"); #create output for comparison
     cmd("$$opts{bin}/samtools faidx $$opts{tmp}/out.fa.gz");