add a Bioinformatics template

NAMESPACE

@@ -2,6 +2,7 @@
 
 export(acm_article)
 export(acs_article)
+export(bioinformatics_article)
 export(ctex)
 export(ctex_template)
 export(elsevier_article)

R/bioinformatics_article.R

@@ -0,0 +1,23 @@
+#' Bioinformatics journal format.
+#'
+#' Format for creating submissions to Bioinformatics journals.
+#'
+#' @inheritParams rmarkdown::pdf_document
+#' @param ... Additional arguments to \code{rmarkdown::pdf_document}
+#'
+#' @return R Markdown output format to pass to
+#'   \code{\link[rmarkdown:render]{render}}
+#'
+#' @examples
+#'
+#' \dontrun{
+#' library(rmarkdown)
+#' draft("MyArticle.Rmd", template = "bioinformatics_article", package = "rticles")
+#' }
+#'
+#' @export
+bioinformatics_article <- function(..., keep_tex = TRUE) {
+  inherit_pdf_document(...,
+                       keep_tex = keep_tex,
+                       template = find_resource("bioinformatics_article", "template.tex"))
+}

README.md

@@ -37,6 +37,8 @@ The **rticles** package provides a suite of custom [R Markdown](http://rmarkdown
 
 - [Elsevier](https://www.elsevier.com) journal submissions
 
+- [Bioinformatics](http://bioinformatics.oxfordjournals.org/) articles
+
 Under the hood, LaTeX templates are used to ensure that documents conform precisely to submission standards. At the same time, composition and formatting can be done using lightweight [markdown](http://rmarkdown.rstudio.com/authoring_basics.html) syntax, and R code and its output can be seamlessly included using [knitr](http://yihui.name/knitr/).
 
 Using **rticles** has some prerequisites which are described below. You can get most of these pre-requisites automatically by installing the latest release of RStudio (instructions for using **rticles** without RStudio are also provided).

inst/rmarkdown/templates/bioinformatics_article/resources/.gitignore

@@ -0,0 +1,7 @@
+*.tex
+*.pdf
+*.aux
+*.synctex.gz
+*.log
+*.pdf
+*.blg