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Rosalind Franklin Institute

The Rosalind Franklin Institute is dedicated to transforming life science through interdisciplinary research and technology development

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  1. RedLionfish RedLionfish Public

    Jupyter Notebook 29 4

  2. cuda-slic cuda-slic Public

    A CUDA implementation of the SLIC Superpixel algorithm

    Jupyter Notebook 20 1

  3. parakeet parakeet Public

    Phantom generator

    Python 19 6

  4. Ot2Rec Ot2Rec Public

    Pipeline to reconstruct cryo-electron tomograms with different software packages

    Python 8 3

  5. python-multem python-multem Public

    Python wrapper for the MULTEM simulation package

    C++ 7

  6. okapi-em okapi-em Public

    napari plugin to deal with charging artifacts in tomography electron microscopy data

    Jupyter Notebook 4

Repositories

Showing 10 of 94 repositories
  • parakeet Public

    Phantom generator

    rosalindfranklininstitute/parakeet’s past year of commit activity
    Python 19 GPL-3.0 6 16 0 Updated Mar 12, 2025
  • korpuskulum Public

    Package to evaluate particle distribution with respect to segmented membranes

    rosalindfranklininstitute/korpuskulum’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Mar 12, 2025
  • fibsem Public Forked from DeMarcoLab/fibsem

    A universal API for FIBSEM control

    rosalindfranklininstitute/fibsem’s past year of commit activity
    Jupyter Notebook 0 MIT 15 0 0 Updated Mar 10, 2025
  • autolamella Public Forked from DeMarcoLab/autolamella

    autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.

    rosalindfranklininstitute/autolamella’s past year of commit activity
    Python 0 MIT 14 0 0 Updated Mar 10, 2025
  • antigen-app Public

    Web app for managing nanobody data

    rosalindfranklininstitute/antigen-app’s past year of commit activity
    JavaScript 3 Apache-2.0 0 3 0 Updated Mar 9, 2025
  • whippet Public
    rosalindfranklininstitute/whippet’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Mar 3, 2025
  • guanaco Public Forked from jmp1985/guanaco
    rosalindfranklininstitute/guanaco’s past year of commit activity
    Python 1 GPL-3.0 2 4 0 Updated Feb 10, 2025
  • volume-segmantics Public Forked from DiamondLightSource/volume-segmantics

    A toolkit for semantic segmentation of volumetric data using PyTorch deep learning models

    rosalindfranklininstitute/volume-segmantics’s past year of commit activity
    Python 1 Apache-2.0 6 0 1 Updated Jan 30, 2025
  • python-multem Public

    Python wrapper for the MULTEM simulation package

    rosalindfranklininstitute/python-multem’s past year of commit activity
    C++ 7 GPL-3.0 0 1 0 Updated Jan 21, 2025
  • MULTEM Public Forked from Ivanlh20/multem
    rosalindfranklininstitute/MULTEM’s past year of commit activity
    C++ 0 GPL-3.0 25 0 0 Updated Jan 21, 2025
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