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Pull requests list

Visualise changes: Update to nf-core template 3.2.1
#84 by samuell was closed May 27, 2025 • Draft
Visualize differences with TEMPLATE 3.2.1
#83 by samuell was closed May 27, 2025 • Draft
80 nanoplot not working properly in branch dev
#82 by fwa93 was merged Jun 3, 2025 Loading…
7
Info
#76 by fwa93 was closed Apr 25, 2025 Loading…
Add phyloseq module
#74 by kdannenberg was merged May 12, 2025 Loading…
43
Add emu combine output into dev
#72 by fwa93 was closed Apr 24, 2025 Loading…
Fix failing CI in dev
#71 by samuell was merged Apr 23, 2025 Loading…
3
19 add emu combine outputs
#69 by fwa93 was closed Apr 22, 2025 • Draft
Update modules and add test profile
#68 by sofstam was merged Apr 16, 2025 Loading…
14
Update modules add tests
#67 by sofstam was closed Apr 15, 2025 Loading…
Update nextflow.config
#65 by fwa93 was closed Mar 25, 2025 Loading…
Merge dev into main re seqtk
#64 by ryanjameskennedy was merged Apr 3, 2025 Loading…
1
Conditionally emit nanostats processed / unprocessed
#63 by AnderssonOlivia was merged Mar 20, 2025 Loading…
3
Add seqtk
#62 by ryanjameskennedy was merged Mar 21, 2025 Loading…
1
15
Add seqtk
#61 by ryanjameskennedy was closed Mar 18, 2025 Loading…
Merge dev into main branch
#60 by ryanjameskennedy was merged Mar 21, 2025 Loading…
2
Add prefix to master html
#59 by ryanjameskennedy was merged Mar 17, 2025 Loading…
1
Conditionally emit nanostats_unprocessed
#58 by AnderssonOlivia was merged Mar 17, 2025 Loading…
3
Updates to dev before merge
#55 by ryanjameskennedy was merged Mar 12, 2025 Loading…
1
Fix dockerfile context
#54 by ryanjameskennedy was merged Mar 10, 2025 Loading…
1
Merge dev branch into main
#53 by ryanjameskennedy was merged Mar 13, 2025 Loading…
5
Fix dependencies for merge barcodes samplesheet
#52 by ryanjameskennedy was merged Mar 7, 2025 Loading…
1
2
Emit qc files and add stubs
#50 by ryanjameskennedy was merged Mar 6, 2025 Loading…
4
Adjust GHA settings to run on every push
#49 by samuell was merged Mar 4, 2025 Loading…
Allow custom barcodes
#48 by mhkc was merged Feb 27, 2025 Loading…
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11
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