Collection of apple-native tools for the model context protocol.

Model Context Protocol Servers

Integrate the DeepSeek API into popular softwares

Arc Virtual Cell Atlas

LLM agents for working with the SRA and associated bioinformatics databases.

Supervised Independent Subspace Principal Component Analysis

A simple pip-installable Python tool to generate your own HTML citation world map from your Google Scholar ID.

ChatMol

Training Large Language Model to Reason in a Continuous Latent Space

inferring regulatory cellular dynamics

scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.

Template repository for analysis of single-cell data and tools.

A visualization grammar and GPU-accelerated toolkit for genomic data

AI app store powered by 24/7 desktop history. open source | 100% local | dev friendly | 24/7 screen, mic recording

User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

Biological sequence analysis for the modern age.

Flexible and scalable template based on PyTorch Lightning + Hydra. Efficient workflow and reproducibility for rapid ML experiments.

Puzzles for learning Triton

Biological foundation modeling from molecular to genome scale

Snakemake workflow for comparing E-G links to experimental data

Detect file content types with deep learning