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examples

Add R markdown notebook to illustrate using the model via R with the …

Jul 1, 2020

38690e2 · Jul 1, 2020

This branch is 63 commits behind BDI-pathogens/OpenABM-Covid19:master.

Name		Name	Last commit message	Last commit date
parent directory ..
results		results	single runner and multi runner example. Needs to integrate simulation…	Apr 16, 2020
economics_visualisation.ipynb		economics_visualisation.ipynb	Rename and remove output from functional economic notebooks	May 29, 2020
example_101.ipynb		example_101.ipynb	Add jupyter notebook of Example 101	Apr 17, 2020
example_101.py		example_101.py	Add example_101.py	Apr 17, 2020
example_102.Rmd		example_102.Rmd	Add R markdown notebook to illustrate using the model via R with the …	Jul 1, 2020
example_102.ipynb		example_102.ipynb	Fix example_102 to include split out of quarantine_household_on_traced	May 16, 2020
example_extended_output.ipynb		example_extended_output.ipynb	added missing hospital file param into example notebook	Jun 11, 2020
example_multiple_working_sectors.ipynb		example_multiple_working_sectors.ipynb	Add an example of introducing multiple working sectors. (BDI-pathogen…	Jul 1, 2020
example_recursive_tests.ipynb		example_recursive_tests.ipynb	Recursive testing and test sensitivity (BDI-pathogens#118 )	Jun 29, 2020
example_run_simulation_with_lockdown.py		example_run_simulation_with_lockdown.py	Fix errors in Makefile when uninstalling	May 13, 2020
example_run_spread_model_for_economics.py		example_run_spread_model_for_economics.py	Format with black	May 29, 2020
example_user_defined_networks.ipynb		example_user_defined_networks.ipynb	Add example of adding a user defined network and demographics data	Jun 12, 2020
example_utils.py		example_utils.py	added missing hospital file param into example notebook	Jun 11, 2020
multi_run_simulator.py		multi_run_simulator.py	set number of threads to sensible number so it doesn't kill your loca…	May 5, 2020
plotting.py		plotting.py	Inclusion of sd of time-to-critical; adjusted to be drawn from gamma …	May 28, 2020