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@epi2me-labs

EPI2ME Labs

Bioinformatics resources from Oxford Nanopore Technologies Plc

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  1. kraken2-server kraken2-server Public

    Kraken2 Server

    C++ 21 4

  2. wf-transcriptomes wf-transcriptomes Public

    Nextflow 88 35

  3. wf-single-cell wf-single-cell Public

    Python 83 41

  4. wf-bacterial-genomes wf-bacterial-genomes Public

    Small variant calling for haploid samples

    Python 32 16

  5. wf-human-variation wf-human-variation Public

    Nextflow 112 57

  6. fastcat fastcat Public

    Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.

    C 35 4

Repositories

Showing 10 of 36 repositories
  • epi2me-labs/wf-basecalling’s past year of commit activity
    Nextflow 37 18 17 1 Updated Mar 7, 2025
  • wf-template Public

    Nextflow workflow template repository

    epi2me-labs/wf-template’s past year of commit activity
    Python 18 35 1 0 Updated Mar 7, 2025
  • epi2me-labs/epi2me-labs.github.io’s past year of commit activity
    HTML 8 2 0 0 Updated Mar 7, 2025
  • ezcharts Public
    epi2me-labs/ezcharts’s past year of commit activity
    Python 18 1 0 0 Updated Mar 7, 2025
  • epi2me-docs Public
    epi2me-labs/epi2me-docs’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 6, 2025
  • epi2me-labs/wf-human-variation’s past year of commit activity
    Nextflow 112 57 30 0 Updated Mar 5, 2025
  • epi2me-labs/wf-single-cell’s past year of commit activity
    Python 83 41 12 0 Updated Mar 3, 2025
  • bed-bugs Public

    bed-bugs website

    epi2me-labs/bed-bugs’s past year of commit activity
    JavaScript 0 0 0 0 Updated Feb 28, 2025
  • epi2me-labs/wf-hereditary-cancer’s past year of commit activity
    Nextflow 2 0 1 0 Updated Feb 25, 2025
  • epi2me-labs/wf-clone-validation’s past year of commit activity
    Python 29 21 7 0 Updated Feb 21, 2025

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