Skip to content
View cpommier's full-sized avatar

Organizations

@plantbreeding @elixir-europe @MIAPPE @Brassica-Trait-Ontology @gnpis

Block or report cpommier

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

The light frontend for BioChatter, in pure Python

Python 52 13 Updated Feb 19, 2025

Scripts and utilities for leveraging SKM resources

Jupyter Notebook 2 Updated Mar 10, 2025

A REST API to query SPARQL endpoint using Apache Superset BI tool

Python 7 Updated Jun 28, 2023

Alternative sparql endpoing via InterMine api -> elastic search -> triples -> qlever or virtuoso -> Apache superset

Jupyter Notebook 1 Updated Jun 30, 2023

Master the command line, in one page

155,097 14,627 Updated Jun 25, 2024

Code snippets to be used during the BrAPI 101: Introduction to BrAPI class

Java 4 1 Updated Nov 16, 2022

ISA tools API

Jupyter Notebook 43 40 Updated Mar 5, 2025

KnetMaps: a BioJS component to visualize biological knowledge networks

JavaScript 10 6 Updated Jun 12, 2023

Development of schemas and ontologies for the agrifood, inspired to schema.org and bioschemas.

Python 4 1 Updated Mar 4, 2025

DBCLS RDFizing database guidelines

15 3 Updated Aug 31, 2024

This is a template to pipeline with the best practises for the development of bioinformatics analysis pipelines with nextflow and geniac (Automatic Configuration GENerator and Installer for nextflo…

Nextflow 2 Updated Sep 8, 2023

Python regular expressions made easy

Python 1,637 114 Updated Apr 28, 2024

Validator for JSON schema based metadata

JavaScript 9 2 Updated Apr 23, 2021

Sparnatural : visual knowledge graph explorer with SPARQL, in the browser, configurable with SHACL

JavaScript 237 44 Updated Feb 27, 2025

Issue tracker, technical wiki, and example markup

HTML 56 52 Updated Jul 11, 2024

Flapjack is a multi-platform application providing interactive visualizations of high-throughput genotype data, allowing for rapid navigation and comparisons between lines, markers and chromosomes.

Java 7 8 Updated Jul 17, 2024

This repo is for the metadata schemas associated with the HCA

Python 67 32 Updated Mar 12, 2025

A repository for outputs of the FAIRPlus project

Python 2 1 Updated Jan 20, 2020

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

Ruby 81 52 Updated Mar 13, 2025

Elixir Excelerate Demonstrator 4.3

HCL 1 Updated Aug 28, 2018

Harvest and index meta data from BrAPI endpoints for data access through the plant-faidare data lookup portal (https://github.com/elixir-europe/plant-faidare).

Python 7 8 Updated Jan 21, 2025

Wheat trait ontology

6 2 Updated Jan 20, 2025

JavaScript BrAPI Client with support for asynchronous interdependent calls.

JavaScript 8 3 Updated Mar 30, 2023

BrAPI Test Server

R 2 4 Updated Sep 15, 2017

Modelling of MIAPPE

8 3 Updated Jan 5, 2023

ISA Model for Java

1 Updated May 31, 2017

BrAPI client

Java 1 Updated May 31, 2017
Next
Showing results