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Merged
merged 33 commits into from
Jun 29, 2022
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c2ad564
:sparkles: add benchmarking scripts
ferzcam Jun 6, 2022
69abc92
:sparkles: add some scripts for benchmarking
ferzcam Jun 6, 2022
f987f1f
:art: update scripts
ferzcam Jun 19, 2022
aeece7e
:sparkles: :construction: started inference module and testing on ELE…
ferzcam Jun 20, 2022
657d941
:sparkles: updated datasets labels
ferzcam Jun 21, 2022
41244a4
:art: update benchmarking scripts
ferzcam Jun 21, 2022
0ace73e
:art: update base models
ferzcam Jun 21, 2022
c7e41f6
:fire: remove unused benchmarking files
ferzcam Jun 21, 2022
4eb157f
:art: update build_ontology script
ferzcam Jun 21, 2022
96894fb
:art:
ferzcam Jun 21, 2022
50e834c
:art:
ferzcam Jun 21, 2022
478ac5f
:art:
ferzcam Jun 21, 2022
9b3a030
:fire
ferzcam Jun 21, 2022
f9deac3
:bug: fix imports
ferzcam Jun 21, 2022
abecb43
:sparkles: add (beta) inference module based on regex
ferzcam Jun 23, 2022
151a363
:bug: fix typing issues among java.lang.String and Python str
ferzcam Jun 23, 2022
205a460
:art: update ElEm model with inference features
ferzcam Jun 23, 2022
135c0cd
:art: update evaluation methods
ferzcam Jun 23, 2022
08a815c
:fire: deleted deprecated scripts
ferzcam Jun 23, 2022
b8398dd
:bug: fix typing issues among java.lang.String and Python str
ferzcam Jun 23, 2022
330822b
:rocket: update setup.py script for Conda compatibility
ferzcam Jun 23, 2022
3bbc7fe
:art: update script to allow returning or saving corpus
ferzcam Jun 26, 2022
08e790f
:art: update script
ferzcam Jun 26, 2022
ef1e056
:fire: remove unused script
ferzcam Jun 26, 2022
0edf4ef
:art: finish first version of inference module
ferzcam Jun 26, 2022
5ee4d4f
:art: update test files
ferzcam Jun 26, 2022
0164b7d
:art: update translational model to export scoring method
ferzcam Jun 26, 2022
5a757f2
:art: finish first version of inference module
ferzcam Jun 26, 2022
ba48bdf
:sparkles: add evaluation methods for predictions
ferzcam Jun 26, 2022
32077a2
:white_check_mark: updated testing files
ferzcam Jun 27, 2022
51d1f39
:white_check_mark: updated benchmarking files
ferzcam Jun 27, 2022
f5150dc
:art: update dataset scripts
ferzcam Jun 27, 2022
dddeccc
:art: update elem and trans scripts
ferzcam Jun 27, 2022
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ferzcam committed Jun 21, 2022

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commit 96894fb9025f069f124bd124283c5bdd39c2b370
8 changes: 6 additions & 2 deletions mowl/embeddings/onto2vec/model.py
Original file line number Diff line number Diff line change
@@ -1,11 +1,15 @@
import os

import sys
sys.path.append("../../../")
import mowl
mowl.init_jvm("3g")
import numpy as np
from scipy.stats import rankdata


from mowl.model import Model
from mowl.reasoning.base import MOWLReasoner
from mowl.corpus import extract_axiom_corpus
from mowl.corpus.base import extract_axiom_corpus
from jpype.types import *

from org.semanticweb.owlapi.model import AxiomType