NGL won't display solvated system if loading from blob

[hainm]

Please check here:

nglviewer/nglview#633 (comment)

[arose]

Can't reproduce so far. The following way of loading from a blob works for me

var url = 'https://path/to/smol.pdb'
fetch(url).then(function(response) {
  return response.blob();
}).then(function(blob) {
  NGL.autoLoad(blob, {ext: 'pdb'}).then(function (structure) {
    var o = stage.addComponentFromObject(structure)
    stage.defaultFileRepresentation(o)
  })
});

[hainm]

Have you tried

stage.loadFile yet?

[arose]

stage.loadFile yet?

yes, that works fine

[hainm]

uhm, I see why now. The new notebook (v5) won't allow to send big chunk of data to front-end.
damn. Not sure what we should do now.

[I 23:30:42.996 NotebookApp] Adapting to protocol v5.1 for kernel a100ee13-f7eb-4e2a-9bbe-e400bdcfd828
[W 23:31:10.938 NotebookApp] IOPub data rate exceeded.
    The notebook server will temporarily stop sending output
    to the client in order to avoid crashing it.
    To change this limit, set the config variable
    `--NotebookApp.iopub_data_rate_limit`.

[hainm]

notebook v5.0 issue.