Move package setup to pyproject.toml

Author: dhimmel

pyproject.toml

@@ -1,3 +1,56 @@
+[build-system]
+requires = ["setuptools>=61", "wheel"]
+build-backend = "setuptools.build_meta"
+
+# https://setuptools.pypa.io/en/latest/userguide/pyproject_config.html
+[project]
+name = "hetmatpy"
+description = "Matrix implementations for hetnets and path-count-based measures"
+readme = "README.md"
+keywords = [
+    "hetnet",
+    "hetmat",
+    "graph",
+    "heterogeneous",
+    "network",
+    "hetio",
+    "hetnetpy",
+    "dwpc",
+    "numpy",
+]
+classifiers = [
+    "Intended Audience :: Science/Research",
+    "Topic :: Scientific/Engineering :: Bio-Informatics",
+    "Topic :: Scientific/Engineering :: Information Analysis",
+]
+requires-python = ">=3.7"
+license = {file = "LICENSE.md"}
+dynamic = ["version"]
+dependencies = [
+    "hetnetpy>=0.3.0",
+    "numpy",
+    "pandas",
+    "scipy",
+]
+
+[project.optional-dependencies]
+dev = [
+    "pre-commit",
+    "portray",
+    "pytest",
+    "xarray",
+]
+
+[project.urls]
+Source = "https://github.com/hetio/hetmatpy"
+Documentation = "https://hetio.github.io/hetmatpy"
+Tracker = "https://github.com/hetio/hetmatpy/issues"
+Homepage = "https://het.io/software/"
+Publication = "https://greenelab.github.io/connectivity-search-manuscript/"
+
+[tool.setuptools.dynamic]
+version = {attr = "hetmatpy.__version__"}
+
 # https://pycqa.github.io/isort/docs/configuration/config_files.html
 [tool.isort]
 profile = "black"

setup.py

@@ -1,49 +1,3 @@
-import pathlib
-import re
-
 import setuptools
 
-directory = pathlib.Path(__file__).parent.resolve()
-
-# version
-init_path = directory.joinpath("hetmatpy", "__init__.py")
-text = init_path.read_text(encoding="utf-8-sig")
-pattern = re.compile(r"^__version__ = ['\"]([^'\"]*)['\"]", re.MULTILINE)
-version = pattern.search(text).group(1)
-
-# long_description
-readme_path = directory.joinpath("README.md")
-long_description = readme_path.read_text(encoding="utf-8-sig")
-
-setuptools.setup(
-    name="hetmatpy",
-    description="Matrix implementations for hetnets and path-count-based measures",
-    long_description_content_type="text/markdown",
-    long_description=long_description,
-    url="https://github.com/hetio/hetmatpy",
-    project_urls={
-        "Source": "https://github.com/hetio/hetmatpy",
-        "Documentation": "https://hetio.github.io/hetmatpy",
-        "Tracker": "https://github.com/hetio/hetmatpy/issues",
-        "Homepage": "https://het.io/software/",
-        "Publication": "https://greenelab.github.io/connectivity-search-manuscript/",
-    },
-    license="BSD-2-Clause Plus Patent License",
-    packages=setuptools.find_packages(),
-    python_requires=">=3.7",
-    install_requires=[
-        "hetnetpy>=0.3.0",
-        "numpy",
-        "pandas",
-        "scipy",
-    ],
-    extras_require={
-        "dev": [
-            "black",
-            "flake8",
-            "portray",
-            "pytest",
-            "xarray",
-        ]
-    },
-)
+setuptools.setup()